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  5. Seita.5G378700.1

Seita.5G378700.1


Description : A1-class (Pepsin) protease & regulatory factor *(PCS1) of tapetal programmed cell death


Gene families : OG_42_0002988 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G378700.1
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Seita.9G461800.1 No alias A1-class (Pepsin) protease & regulatory factor *(PCS1)... 0.05 Orthogroups_2024-Update
Solyc02g065050 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 65 232
IPR032799 TAXi_C 259 425
No external refs found!