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  5. Seita.5G381900.1

Seita.5G381900.1


Description : RopGEF guanine nucleotide exchange factor *(PRONE)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G381900.1
Cluster HCAA Clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
62955 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Orthogroups_2024-Update
Glyma.07G085000 No alias RHO guanyl-nucleotide exchange factor 8 0.02 Orthogroups_2024-Update
HORVU6Hr1G050860.4 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update
LOC_Os01g55520 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.02 Orthogroups_2024-Update
MA_79976g0010 No alias (at3g24620 : 322.0) Encodes a member of KPP-like gene... 0.03 Orthogroups_2024-Update
PSME_00007065-RA No alias (at4g13240 : 421.0) Encodes a member of KPP-like gene... 0.01 Orthogroups_2024-Update
PSME_00012323-RA No alias (at4g38430 : 111.0) Member of the RopGEF (guanine... 0.01 Orthogroups_2024-Update
PSME_00055388-RA No alias (at5g05940 : 89.0) Encodes a member of KPP-like gene... 0.01 Orthogroups_2024-Update
Sobic.001G305300.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update
Sobic.003G254200.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update
Sobic.004G269100.4 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.04 Orthogroups_2024-Update
Solyc06g066650 No alias rop guanine nucleotide exchange factor-like protein... 0.01 Orthogroups_2024-Update
Solyc07g032730 No alias rop guanine nucleotide exchange factor-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005512 PRONE_dom 71 440
No external refs found!