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  4. Sequence
  5. Seita.5G385000.1

Seita.5G385000.1


Description : Unknown function


Gene families : OG_42_0010044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G385000.1
Cluster HCAA Clusters: Cluster_225


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 156 205
IPR002885 Pentatricopeptide_repeat 367 415
IPR002885 Pentatricopeptide_repeat 648 695
IPR002885 Pentatricopeptide_repeat 227 276
IPR002885 Pentatricopeptide_repeat 472 521
IPR002885 Pentatricopeptide_repeat 578 625
IPR002885 Pentatricopeptide_repeat 329 358
IPR002885 Pentatricopeptide_repeat 436 466
IPR002885 Pentatricopeptide_repeat 538 569
IPR002885 Pentatricopeptide_repeat 294 326
No external refs found!