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  5. Seita.5G389900.1

Seita.5G389900.1


Description : acidic chitinase *(CHIA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G389900.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Brara.F02630.1 No alias acidic chitinase *(CHIA) 0.02 Orthogroups_2024-Update
Brara.I00586.1 No alias acidic chitinase *(CHIA) 0.02 Orthogroups_2024-Update
GRMZM5G837822 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.01G055200 No alias chitinase A 0.05 Orthogroups_2024-Update
Glyma.10G227700 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.20G164600 No alias chitinase A 0.02 Orthogroups_2024-Update
Seita.2G107300.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Seita.5G275500.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sobic.003G244600.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sopen01g039100 No alias Glycosyl hydrolases family 18 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 28 285
No external refs found!