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  5. Seita.5G392000.1

Seita.5G392000.1


Description : Unknown function


Gene families : OG_42_0001279 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G392000.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_16956 No alias protein yls9 0.03 Orthogroups_2024-Update
A4A49_24264 No alias ndr1hin1-like protein 3 0.03 Orthogroups_2024-Update
A4A49_64938 No alias protein yls9 0.03 Orthogroups_2024-Update
Brara.B00382.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G106792 No alias NDR1/HIN1-like 2 0.02 Orthogroups_2024-Update
Glyma.03G201550 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update
Glyma.07G103800 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Seita.5G392200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 101 204
No external refs found!