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  5. Seita.5G392200.1

Seita.5G392200.1


Description : Unknown function


Gene families : OG_42_0001279 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G392200.1
Cluster HCAA Clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
A4A49_24264 No alias ndr1hin1-like protein 3 0.02 Orthogroups_2024-Update
At2g35980 No alias NDR1/HIN1-like protein 10... 0.03 Orthogroups_2024-Update
At5g06320 No alias NHL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UB58] 0.03 Orthogroups_2024-Update
Brara.A03396.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.07G103900 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update
Glyma.10G079900 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Orthogroups_2024-Update
LOC_Os08g01210 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_71979g0010 No alias (at3g11650 : 114.0) Encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
Seita.5G392000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G274300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g081980 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 112 204
No external refs found!