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  5. Seita.5G393000.1

Seita.5G393000.1


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G393000.1
Cluster HCAA Clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
A4A49_64884 No alias actin 0.02 Orthogroups_2024-Update
At1g49240 No alias Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293] 0.02 Orthogroups_2024-Update
Bradi1g10630 No alias actin-11 0.03 Orthogroups_2024-Update
Bradi2g56000 No alias actin 7 0.02 Orthogroups_2024-Update
Brara.D02290.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Brara.E02875.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.02 Orthogroups_2024-Update
HORVU3Hr1G083370.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G083380.4 No alias actin filament protein 0.03 Orthogroups_2024-Update
LOC_Os01g64630 No alias actin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g73310 No alias actin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g36650 No alias actin, putative, expressed 0.04 Orthogroups_2024-Update
Mp6g10990.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
PSME_00051304-RA No alias (at5g09810 : 651.0) Member of Actin gene family.Mutants... 0.02 Orthogroups_2024-Update
Seita.3G227300.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Sobic.009G153000.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Solyc01g104770 No alias transcription factor (AHRD V3.3 *** AT1G76870.3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 4 376
No external refs found!