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  5. Seita.5G396500.1

Seita.5G396500.1


Description : anion transporter *(NRT1/PTR)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G396500.1
Cluster HCAA Clusters: metabolic processCluster_188

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g67630 No alias peptide transporter PTR2, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00019452-RA No alias (at5g46040 : 570.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.016G103500 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 108 467
No external refs found!