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  5. Seita.5G398000.1

Seita.5G398000.1


Description : MYB class-R2R3 subgroup-4 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G398000.1
Cluster HCAA Clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
A4A49_06981 No alias transcription factor gamyb 0.03 Orthogroups_2024-Update
A4A49_28332 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
At3g28910 No alias Transcription factor MYB30... 0.03 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.I04218.1 No alias accessory protein (LMI2) of floral meristem identity control 0.05 Orthogroups_2024-Update
Brara.I04881.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.01 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.01 Orthogroups_2024-Update
Glyma.19G055800 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g74410 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g40330 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
MA_21440g0010 No alias "(at2g47460 : 187.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
PSME_00029148-RA No alias (at3g61250 : 258.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
Potri.004G215100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Seita.8G057800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Solyc02g079280 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.02 Orthogroups_2024-Update
Solyc05g009230 No alias Myb domain protein (AHRD V3.3 *** K7PMP7_HEVBR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!