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  5. Seita.5G398800.1

Seita.5G398800.1


Description : serine hydroxymethyltransferase *(SHM) & serine hydroxymethyltransferase *(MSA1) & EC_2.1 transferase transferring one-carbon group


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.5G398800.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
166496 No alias serine hydroxymethyltransferase 4 0.03 Orthogroups_2024-Update
A4A49_33285 No alias serine hydroxymethyltransferase, mitochondrial 0.03 Orthogroups_2024-Update
At4g13890 No alias Serine hydroxymethyltransferase 5... 0.05 Orthogroups_2024-Update
Bradi4g19470 No alias serine hydroxymethyltransferase 4 0.03 Orthogroups_2024-Update
Glyma.08G108900 No alias serine hydroxymethyltransferase 4 0.05 Orthogroups_2024-Update
HORVU3Hr1G082070.3 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.03 Orthogroups_2024-Update
Mp2g08370.1 No alias serine hydroxymethyltransferase 0.01 Orthogroups_2024-Update
PSME_00015002-RA No alias (p49358|glyn_flapr : 512.0) Serine... 0.03 Orthogroups_2024-Update
Solyc02g091560 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** A0A0R4J3Y9_SOYBN) 0.02 Orthogroups_2024-Update
Sopen12g033270 No alias Serine hydroxymethyltransferase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 135 538
No external refs found!