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  5. Seita.5G403700.1

Seita.5G403700.1


Description : substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0003739 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003739_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G403700.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56920 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.H02283.1 No alias substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sopen04g026300 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 156 175
IPR001611 Leu-rich_rpt 212 232
IPR001611 Leu-rich_rpt 261 284
IPR001611 Leu-rich_rpt 235 258
IPR001810 F-box_dom 41 76
No external refs found!