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  5. Seita.5G412800.1

Seita.5G412800.1


Description : beta-type-2 component *(PBB) of 26S proteasome


Gene families : OG_42_0004476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G412800.1
Cluster HCAA Clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_32948 No alias proteasome subunit beta type-7-b 0.03 Orthogroups_2024-Update
Bradi2g05660 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.07 Orthogroups_2024-Update
Bradi2g33390 No alias 20S proteasome beta subunit PBB2 0.06 Orthogroups_2024-Update
Brara.B03299.1 No alias beta-type-2 component *(PBB) of 26S proteasome 0.03 Orthogroups_2024-Update
Cre10.g424400 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.08 Orthogroups_2024-Update
Kfl00092_0220 kfl00092_0220_v1.1 (at5g40580 : 380.0) Encodes 20S proteasome beta subunit... 0.02 Orthogroups_2024-Update
LOC_Os05g09490 No alias peptidase, T1 family, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436996g0010 No alias (at5g40580 : 467.0) Encodes 20S proteasome beta subunit... 0.03 Orthogroups_2024-Update
Potri.004G066000 No alias 20S proteasome beta subunit PBB2 0.05 Orthogroups_2024-Update
Potri.017G071100 No alias 20S proteasome beta subunit PBB2 0.07 Orthogroups_2024-Update
Pp1s197_119V6 No alias proteasome subunit beta type 7-a precursor 0.02 Orthogroups_2024-Update
Sobic.002G087000.1 No alias beta-type-2 component *(PBB) of 26S proteasome 0.11 Orthogroups_2024-Update
evm.model.contig_2096.8 No alias (at5g40580 : 329.0) Encodes 20S proteasome beta subunit... 0.04 Orthogroups_2024-Update
evm.model.tig00020848.74 No alias (at5g40580 : 305.0) Encodes 20S proteasome beta subunit... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA 16Dec
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 90 270
No external refs found!