1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G415100.1

Seita.5G415100.1


Description : Unknown function


Gene families : OG_42_0000739 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000739_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G415100.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At3g50350 No alias Membrane insertase, putative (DUF1685)... 0.03 Orthogroups_2024-Update
Brara.D01898.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02629.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01236.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G137120 No alias Protein of unknown function (DUF1685) 0.06 Orthogroups_2024-Update
HORVU3Hr1G089370.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G089380.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os12g12880 No alias expressed protein 0.04 Orthogroups_2024-Update
PSME_00055008-RA No alias (at2g43340 : 149.0) Protein of unknown function... 0.06 Orthogroups_2024-Update
PSME_00055950-RA No alias (at5g28690 : 108.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Seita.1G331500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G105200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G389700.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012881 DUF1685 64 120
No external refs found!