Description : E3 ubiquitin ligase
Gene families : OG_42_0003264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003264_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.5G416600.1 | |
Cluster | HCAA Clusters: Cluster_52 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g27910 | No alias | U-box domain-containing protein 45... | 0.03 | Orthogroups_2024-Update | |
Glyma.05G146300 | No alias | ARM repeat superfamily protein | 0.06 | Orthogroups_2024-Update | |
Pp1s98_77V6 | No alias | F3I6.27; armadillo/beta-catenin repeat family protein /... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | 16Dec |
BP | GO:0016567 | protein ubiquitination | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
MF | GO:0008297 | single-stranded DNA exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Predicted GO |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0035312 | 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
MF | GO:0045145 | single-stranded DNA 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 295 | 364 |
No external refs found! |