Seita.5G425300.1

Description : MADS/AGL-type transcription factor

Gene families : OG_42_0008146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008146_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.5G425300.1
Cluster	HCAA Clusters: Cluster_211

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
BP	GO:0010206	photosystem II repair	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0030091	protein repair	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	19	52

External Links

No external refs found!