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  5. Seita.5G433600.1

Seita.5G433600.1


Description : component *(bL27c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G433600.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_35915 No alias 50s ribosomal protein l27, chloroplastic 0.05 Orthogroups_2024-Update
Bradi2g59210 No alias ribosomal protein large subunit 27 0.04 Orthogroups_2024-Update
Cre06.g300800 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
Glyma.11G151300 No alias ribosomal protein large subunit 27 0.04 Orthogroups_2024-Update
HORVU3Hr1G095330.1 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Kfl00181_0180 kfl00181_0180_v1.1 (at2g16930 : 127.0) Ribosomal protein L27 family... 0.01 Orthogroups_2024-Update
Kfl00287_0170 kfl00287_0170_v1.1 (p30155|rk27_tobac : 140.0) 50S ribosomal protein L27,... 0.04 Orthogroups_2024-Update
LOC_Os01g69950 No alias ribosomal protein L27, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G329500 No alias ribosomal protein large subunit 27 0.05 Orthogroups_2024-Update
Pp1s167_18V6 No alias ribosomal protein l27 0.04 Orthogroups_2024-Update
Pp1s19_202V6 No alias ribosomal protein l27 0.02 Orthogroups_2024-Update
Sobic.003G408000.2 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.17 Orthogroups_2024-Update
Solyc11g068820 No alias 50S ribosomal protein L27 0.04 Orthogroups_2024-Update
Sopen11g027540 No alias Ribosomal L27 protein 0.05 Orthogroups_2024-Update
evm.model.tig00022075.47 No alias (p30155|rk27_tobac : 110.0) 50S ribosomal protein L27,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 57 136
No external refs found!