At4g28140

Description : Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g28140
Cluster	HCCA clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.03	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.03	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.02	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.03	Orthogroups_2024-Update
A4A49_30015	No alias	ethylene-responsive transcription factor erf019	0.03	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.03	Orthogroups_2024-Update
A4A49_36078	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
At1g36060	No alias	Ethylene-responsive transcription factor ERF055...	0.04	Orthogroups_2024-Update
At1g74930	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.04	Orthogroups_2024-Update
At2g47520	No alias	Ethylene-responsive transcription factor ERF071...	0.04	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.04	Orthogroups_2024-Update
At5g43410	No alias	Ethylene-responsive transcription factor ERF096...	0.03	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi2g31480	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Bradi2g52370	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Bradi3g50490	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Bradi5g24110	No alias	related to AP2 10	0.02	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.G01933.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Cre08.g364400	No alias	DORNROSCHEN-like	0.02	Orthogroups_2024-Update
GRMZM2G076896	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G307152	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G481668	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.02G080200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G159800	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G077680.2	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G098330.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU3Hr1G026970.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G023110.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g21120	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08490	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46400	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g25260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Potri.001G110500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G201600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.005G168700	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G186300	No alias	DORNROSCHEN-like	0.03	Orthogroups_2024-Update
Potri.010G125600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s276_3V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s61_230V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G080100.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Seita.5G348100.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G481300.1	No alias	subgroup ERF-VII transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.05	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.04	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.03	Orthogroups_2024-Update
Solyc05g050830	No alias	Ethylene-responsive transcription factor4	0.03	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	143	192

External Links

No external refs found!

At4g28140

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation