1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G436600.1

Seita.5G436600.1


Description : E2 ubiquitin-conjugating enzyme *(UBC27)


Gene families : OG_42_0007569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007569_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G436600.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G095890.1 No alias E2 ubiquitin-conjugating enzyme *(UBC27) 0.03 Orthogroups_2024-Update
Sobic.003G410200.1 No alias E2 ubiquitin-conjugating enzyme *(UBC27) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR015940 UBA 158 191
IPR000608 UBQ-conjugat_E2 6 145
No external refs found!