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  5. Seita.5G439600.1

Seita.5G439600.1


Description : Unknown function


Gene families : OG_42_0000960 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G439600.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_01273 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.E02522.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G009000 No alias Function unknown 0.06 Orthogroups_2024-Update
Glyma.02G068100 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU3Hr1G096890.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G072400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g024750 No alias Cotton fibre expressed protein 0.02 Orthogroups_2024-Update
Sopen12g003340 No alias Cotton fibre expressed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR008480 DUF761_pln 200 220
No external refs found!