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  5. Seita.5G445100.1

Seita.5G445100.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0000468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G445100.1
Cluster HCAA Clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
Brara.H03091.1 No alias A1-class (Pepsin) protease 0.02 Orthogroups_2024-Update
LOC_Os09g25910 No alias xylanase inhibitor, putative, expressed 0.02 Orthogroups_2024-Update
Solyc01g079920 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 57 220
IPR032799 TAXi_C 255 418
No external refs found!