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  5. Seita.5G448400.1

Seita.5G448400.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G448400.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.03 Orthogroups_2024-Update
Bradi2g27140 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G105300.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU3Hr1G105620.3 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g31140 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432716g0030 No alias (p49237|e13b_maize : 223.0) Glucan... 0.04 Orthogroups_2024-Update
MA_28098g0010 No alias (p23546|e13e_tobac : 267.0) Glucan... 0.04 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc02g086700 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 32 338
No external refs found!