1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G449500.1

Seita.5G449500.1


Description : gamma-aminobutyric acid transporter *(GABP)


Gene families : OG_42_0001460 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G449500.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
A4A49_38636 No alias amino-acid permease bat1-like protein 0.02 Orthogroups_2024-Update
At2g01170 No alias Amino-acid permease BAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU50] 0.03 Orthogroups_2024-Update
GRMZM2G030814 No alias bidirectional amino acid transporter 1 0.05 Orthogroups_2024-Update
HORVU3Hr1G105870.5 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update
Kfl00027_0200 kfl00027_0200_v1.1 (at2g01170 : 346.0) Encodes a bidirectional amino acid... 0.02 Orthogroups_2024-Update
Kfl00169_0190 kfl00169_0190_v1.1 (at2g01170 : 311.0) Encodes a bidirectional amino acid... 0.02 Orthogroups_2024-Update
Kfl00169_0200 kfl00169_0200_v1.1 (at2g01170 : 246.0) Encodes a bidirectional amino acid... 0.02 Orthogroups_2024-Update
PSME_00048661-RA No alias (at2g01170 : 395.0) Encodes a bidirectional amino acid... 0.02 Orthogroups_2024-Update
Potri.010G119100 No alias bidirectional amino acid transporter 1 0.03 Orthogroups_2024-Update
Seita.5G449100.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update
Sobic.003G422600.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.05 Orthogroups_2024-Update
Sobic.003G422800.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 34 490
No external refs found!