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  5. Seita.5G452400.1

Seita.5G452400.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G452400.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G037327 No alias tonoplast intrinsic protein 1;3 0.02 Orthogroups_2024-Update
Glyma.11G034000 No alias tonoplast intrinsic protein 2;3 0.03 Orthogroups_2024-Update
Glyma.13G333100 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
LOC_Os01g13120 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G007500.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Sopen06g032050 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 64 275
No external refs found!