Description : component *(eS10) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001576_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.5G462400.1 | |
Cluster | HCAA Clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
37555 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.05 | Orthogroups_2024-Update | |
A4A49_36949 | No alias | 40s ribosomal protein s10-3 | 0.07 | Orthogroups_2024-Update | |
A4A49_64300 | No alias | 40s ribosomal protein s10-3 | 0.09 | Orthogroups_2024-Update | |
At4g25740 | No alias | 40S ribosomal protein S10-1... | 0.03 | Orthogroups_2024-Update | |
At5g52650 | No alias | 40S ribosomal protein S10-3... | 0.04 | Orthogroups_2024-Update | |
Bradi2g61560 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.05 | Orthogroups_2024-Update | |
Bradi3g43060 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.1 | Orthogroups_2024-Update | |
Brara.A01568.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
Brara.C01425.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
Brara.D01152.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.G01517.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.K00178.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Cre09.g411100 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.1 | Orthogroups_2024-Update | |
GRMZM2G171484 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.08 | Orthogroups_2024-Update | |
Glyma.01G222100 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.12 | Orthogroups_2024-Update | |
Glyma.08G017500 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.02 | Orthogroups_2024-Update | |
Glyma.11G021700 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.1 | Orthogroups_2024-Update | |
HORVU0Hr1G004700.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
HORVU3Hr1G111760.2 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
LOC_Os04g35090 | No alias | 40S ribosomal protein S10, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_111018g0010 | No alias | (q9ayp4|rs10_orysa : 184.0) 40S ribosomal protein S10 -... | 0.04 | Orthogroups_2024-Update | |
MA_314020g0010 | No alias | (q9ayp4|rs10_orysa : 182.0) 40S ribosomal protein S10 -... | 0.04 | Orthogroups_2024-Update | |
Mp2g00580.1 | No alias | component RPS10 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
PSME_00025508-RA | No alias | (q9ayp4|rs10_orysa : 181.0) 40S ribosomal protein S10 -... | 0.04 | Orthogroups_2024-Update | |
PSME_00031081-RA | No alias | (q9ayp4|rs10_orysa : 170.0) 40S ribosomal protein S10 -... | 0.04 | Orthogroups_2024-Update | |
Potri.004G073500 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.06 | Orthogroups_2024-Update | |
Potri.013G027900 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.03 | Orthogroups_2024-Update | |
Pp1s255_28V6 | No alias | 40s ribosomal protein s10 | 0.1 | Orthogroups_2024-Update | |
Pp1s281_7V6 | No alias | 40s ribosomal protein s10 | 0.09 | Orthogroups_2024-Update | |
Pp1s427_37V6 | No alias | 40s ribosomal protein s10 | 0.08 | Orthogroups_2024-Update | |
Pp1s43_46V6 | No alias | 40s ribosomal protein s10 | 0.11 | Orthogroups_2024-Update | |
Pp1s95_87V6 | No alias | 40s ribosomal protein s10 | 0.02 | Orthogroups_2024-Update | |
Seita.7G099000.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.003G436700.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.19 | Orthogroups_2024-Update | |
Sobic.006G081100.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
Solyc01g099670 | No alias | meloidogyne-induced giant cell protein db212 | 0.13 | Orthogroups_2024-Update | |
Sopen01g043180 | No alias | Plectin/S10 domain | 0.11 | Orthogroups_2024-Update | |
Sopen12g032370 | No alias | Plectin/S10 domain | 0.12 | Orthogroups_2024-Update | |
evm.model.contig_636.5 | No alias | (q9ayp4|rs10_orysa : 95.9) 40S ribosomal protein S10 -... | 0.15 | Orthogroups_2024-Update | |
evm.model.tig00001164.5 | No alias | (original description: no original description) | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0031369 | translation initiation factor binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005326 | S10_plectin_N | 3 | 94 |
No external refs found! |