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  5. Seita.5G463400.1

Seita.5G463400.1


Description : Qc-type SYP6-group component of SNARE membrane fusion complex


Gene families : OG_42_0003206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G463400.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Cre06.g290100 No alias syntaxin of plants 61 0.02 Orthogroups_2024-Update
Glyma.02G291600 No alias syntaxin of plants 61 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0048193 Golgi vesicle transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 177 228
IPR015260 Syntaxin-6_N 6 98
No external refs found!