Seita.6G003700.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.6G003700.1
Cluster	HCAA Clusters: Cluster_258

Target	Alias	Description	ECC score	Gene Family Method
At1g79580	No alias	Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]	0.02	Orthogroups_2024-Update
At5g07680	No alias	NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]	0.02	Orthogroups_2024-Update
Brara.B03811.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.C00759.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D00978.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02061.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00688.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01434.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J00883.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J01823.1	No alias	NAC-type transcription factor	0.01	Orthogroups_2024-Update
Brara.J02533.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G440219	No alias	NAC 007	0.02	Orthogroups_2024-Update
Glyma.05G055900	No alias	NAC 007	0.03	Orthogroups_2024-Update
Glyma.06G080200	No alias	NAC domain containing protein 38	0.02	Orthogroups_2024-Update
Glyma.10G216400	No alias	vascular related NAC-domain protein 7	0.05	Orthogroups_2024-Update
MA_33912g0010	No alias	(at5g61430 : 169.0) NAC domain containing protein 100...	0.05	Orthogroups_2024-Update
Potri.004G081000	No alias	NAC domain containing protein 28	0.02	Orthogroups_2024-Update
Potri.012G056300	No alias	NAC domain containing protein 58	0.02	Orthogroups_2024-Update
Pp1s1_447V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s42_248V6	No alias	nac domain-containing	0.06	Orthogroups_2024-Update
Sobic.006G279400.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sopen06g023890	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen08g001990	No alias	No apical meristem (NAM) protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
BP	GO:0000723	telomere maintenance	IEP	Predicted GO
MF	GO:0003678	DNA helicase activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
BP	GO:0006281	DNA repair	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006473	protein acetylation	IEP	Predicted GO
BP	GO:0006475	internal protein amino acid acetylation	IEP	Predicted GO
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predicted GO
BP	GO:0006996	organelle organization	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
BP	GO:0016569	covalent chromatin modification	IEP	Predicted GO
BP	GO:0016570	histone modification	IEP	Predicted GO
BP	GO:0016573	histone acetylation	IEP	Predicted GO
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predicted GO
BP	GO:0018205	peptidyl-lysine modification	IEP	Predicted GO
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Predicted GO
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
BP	GO:0032200	telomere organization	IEP	Predicted GO
BP	GO:0033554	cellular response to stress	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0043543	protein acylation	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0051716	cellular response to stimulus	IEP	Predicted GO
BP	GO:0060249	anatomical structure homeostasis	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	14	157

External Links

No external refs found!

Seita.6G003700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation