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  5. At4g28600

At4g28600


Description : no pollen germination related 2 [Source:TAIR;Acc:AT4G28600]


Gene families : OG_42_0000959 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g28600
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
404439 No alias tetratricopeptide repeat (TPR)-containing protein 0.02 Orthogroups_2024-Update
At1g27460 No alias Protein NPGR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB03] 0.04 Orthogroups_2024-Update
Brara.A00863.1 No alias component *(NPG) of phosphatidylinositol 4-kinase complex 0.03 Orthogroups_2024-Update
Pp1s7_119V6 No alias o-linked n-acetylglucosamine 0.03 Orthogroups_2024-Update
Sopen06g026360 No alias Tetratricopeptide repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 629 657
No external refs found!