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  5. Seita.6G020200.1

Seita.6G020200.1


Description : Unknown function


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G020200.1
Cluster HCAA Clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Bradi1g32230 No alias BTB-POZ and MATH domain 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G082950.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g20590 No alias MBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os08g13030 No alias MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
LOC_Os08g13250 No alias speckle-type POZ protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G059600 No alias BTB/POZ/MATH-domains containing protein 0.03 Orthogroups_2024-Update
Seita.4G267800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.006G038300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00000402.18 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!