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  5. Seita.6G036700.1

Seita.6G036700.1


Description : starch synthase *(SS3)


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G036700.1
Cluster HCAA Clusters: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G260500 No alias starch synthase 3 0.02 Orthogroups_2024-Update
MA_174926g0010 No alias (q43846|ssy3_soltu : 140.0) Soluble starch synthase 3,... 0.03 Orthogroups_2024-Update
Pp1s104_136V6 No alias soluble starch synthase iv-1 0.02 Orthogroups_2024-Update
Pp1s38_153V6 No alias soluble starch synthase iv-2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
InterPro domains Description Start Stop
IPR005085 CBM25 663 743
IPR005085 CBM25 999 1084
IPR005085 CBM25 837 922
IPR013534 Starch_synth_cat_dom 1095 1282
No external refs found!