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  5. Seita.6G038200.1

Seita.6G038200.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G038200.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44880 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G096100 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Glyma.20G090200 No alias germin-like protein 10 0.04 Orthogroups_2024-Update
LOC_Os08g09010 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g09040 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00017404-RA No alias (at1g09560 : 254.0) germin-like protein (GLP5);... 0.02 Orthogroups_2024-Update
Potri.013G064000 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G427900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G053200.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 210
No external refs found!