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  5. Seita.6G048400.1

Seita.6G048400.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G048400.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
A4A49_06164 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
A4A49_23060 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
A4A49_36773 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
AC217050.4_FG007 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Bradi3g15956 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Bradi5g01823 No alias terpene synthase 21 0.04 Orthogroups_2024-Update
Brara.C04261.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
GRMZM2G038153 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G004370.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
HORVU5Hr1G004700.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
LOC_Os03g31430 No alias terpene synthase, N-terminal domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g27430 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G415100 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Potri.011G142800 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G048900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.01 Orthogroups_2024-Update
Seita.6G066400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.001G173000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.002G065600.2 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G035800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G055500.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.007G133900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g059930 No alias sesquiterpene synthase 1 0.03 Orthogroups_2024-Update
Solyc07g051940 No alias Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Solyc12g006570 No alias Sesquiterpene synthase (AHRD V3.3 *** G5CV52_SOLLC) 0.04 Orthogroups_2024-Update
Sopen12g002520 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 227 491
IPR001906 Terpene_synth_N 28 196
No external refs found!