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  5. Seita.6G055100.1

Seita.6G055100.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G055100.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
A4A49_16806 No alias flavin-dependent oxidoreductase fox2 0.02 Orthogroups_2024-Update
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.03 Orthogroups_2024-Update
A4A49_37478 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
AC203909.3_FG007 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
At1g11770 No alias Berberine bridge enzyme-like 2... 0.03 Orthogroups_2024-Update
At1g26380 No alias Berberine bridge enzyme-like 3... 0.02 Orthogroups_2024-Update
At1g30710 No alias Berberine bridge enzyme-like 9... 0.03 Orthogroups_2024-Update
At4g20830 No alias Berberine bridge enzyme-like 19... 0.03 Orthogroups_2024-Update
At5g44410 No alias Berberine bridge enzyme-like 27... 0.02 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.07 Orthogroups_2024-Update
Bradi3g09380 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi4g18970 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.05 Orthogroups_2024-Update
Brara.I02779.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I03113.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G124900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G125000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G125200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.05G125600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.06 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G132600 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.15G134200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G086520.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os02g14090 No alias berberine and berberine like domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g06180 No alias reticuline oxidase precursor, putative 0.03 Orthogroups_2024-Update
MA_10144220g0010 No alias (at5g44400 : 204.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_10428737g0020 No alias (at5g44380 : 85.1) FAD-binding Berberine family protein;... 0.02 Orthogroups_2024-Update
MA_10430302g0010 No alias (at4g20820 : 150.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_162773g0010 No alias (at4g20860 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_260168g0010 No alias (at1g30760 : 184.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.08 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00034781-RA No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Potri.001G459200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G462800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G464800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G156000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G163000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Seita.4G178200.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Seita.4G178600.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.05 Orthogroups_2024-Update
Seita.6G216800.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.007G048600.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Sobic.010G162900.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.07 Orthogroups_2024-Update
Sobic.010G163000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update
Solyc10g054460 No alias FAD-binding Berberine family protein, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 471 532
IPR006094 Oxid_FAD_bind_N 83 222
No external refs found!