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  5. Seita.6G056400.1

Seita.6G056400.1


Description : Unknown function


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G056400.1
Cluster HCAA Clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
A4A49_36602 No alias putative e3 ubiquitin-protein ligase xerico 0.02 Orthogroups_2024-Update
At1g63840 No alias At1g63840/T12P18_14 [Source:UniProtKB/TrEMBL;Acc:Q9CAJ8] 0.04 Orthogroups_2024-Update
Brara.C02915.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Brara.I01375.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
GRMZM2G318408 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Glyma.04G153400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G235600 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
MA_8362328g0010 No alias (at2g04240 : 118.0) Encodes a small protein with an... 0.02 Orthogroups_2024-Update
PSME_00056848-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.005G081200 No alias RING-H2 finger A2A 0.03 Orthogroups_2024-Update
Sobic.004G280900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G046400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g054370 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 109 153
No external refs found!