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  5. Seita.6G058400.1

Seita.6G058400.1


Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G058400.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Bradi3g30380 No alias vesicle associated protein 0.03 Orthogroups_2024-Update
Brara.B02949.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Brara.H02856.1 No alias contact site protein (VAP27) of... 0.01 Orthogroups_2024-Update
Glyma.01G210100 No alias plant VAP homolog 12 0.03 Orthogroups_2024-Update
HORVU2Hr1G097220.19 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Mp3g04340.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Pp1s44_316V6 No alias vesicle-associated membrane 0.04 Orthogroups_2024-Update
Sobic.006G160200.1 No alias contact site protein (VAP27) of... 0.04 Orthogroups_2024-Update
Solyc08g078000 No alias Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 9 111
No external refs found!