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  5. Seita.6G065500.1

Seita.6G065500.1


Description : MYB-RELATED transcription factor *(MYB-R-R)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G065500.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At5g58900 No alias Homeodomain-like transcriptional regulator... 0.03 Orthogroups_2024-Update
Bradi2g05590 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi5g26110 No alias Duplicated homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.C00176.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.C01242.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.F00380.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.J02638.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Cre03.g198800 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.01G038600 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.05G013000 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G062300 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G175500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G176500 No alias Homeodomain-like transcriptional regulator 0.04 Orthogroups_2024-Update
Glyma.18G134200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g58020 No alias MYB_Al protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp5g11830.1 No alias transcription factor (MYB-related) 0.02 Orthogroups_2024-Update
PSME_00003776-RA No alias (at5g47390 : 201.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00042339-RA No alias (at2g38090 : 209.0) Duplicated homeodomain-like... 0.03 Orthogroups_2024-Update
PSME_00053886-RA No alias (at2g38090 : 199.0) Duplicated homeodomain-like... 0.03 Orthogroups_2024-Update
Potri.001G189800 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G191800 No alias myb-like transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G297500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G076500.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G211200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.009G157500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Sobic.009G253300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Solyc04g005100 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc06g071230 No alias MYB transcription factor (AHRD V3.3 *** A1DR86_CATRO) 0.02 Orthogroups_2024-Update
Solyc08g078340 No alias MYB transcription factor (AHRD V3.3 *** T2DNE9_PHAVU) 0.03 Orthogroups_2024-Update
Sopen10g028480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen12g023090 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 95 140
No external refs found!