Seita.6G067700.1

Description : EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase

Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.6G067700.1
Cluster	HCAA Clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
121532	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
78872	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Bradi3g14750	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.06	Orthogroups_2024-Update
Bradi3g14760	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.07	Orthogroups_2024-Update
Bradi3g14780	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.08	Orthogroups_2024-Update
HORVU1Hr1G077560.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Mp7g06530.1	No alias	aromatic L-amino acid decarboxylase	0.02	Orthogroups_2024-Update
Potri.002G255600	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
Potri.004G036200	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
Potri.016G114300	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Seita.2G117700.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.03	Orthogroups_2024-Update
Seita.8G209800.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.03	Orthogroups_2024-Update
Sobic.003G116500.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
Sobic.007G035000.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.03	Orthogroups_2024-Update
Solyc03g045020	No alias	Tyrosine decarboxylase (AHRD V3.3 *** W5XTE8_SOLTU)	0.02	Orthogroups_2024-Update
Sopen07g028220	No alias	Pyridoxal-dependent decarboxylase conserved domain	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	16Dec
BP	GO:0019752	carboxylic acid metabolic process	IEA	16Dec
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	16Dec
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	58	440

External Links

No external refs found!

Seita.6G067700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation