1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G071200.1

Seita.6G071200.1


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G071200.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G123963 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Glyma.08G205100 No alias receptor like protein 40 0.05 Orthogroups_2024-Update
Glyma.14G046000 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os12g12130 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.011G021332 No alias receptor like protein 7 0.04 Orthogroups_2024-Update
Potri.012G025300 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Potri.T085500 No alias receptor like protein 34 0.03 Orthogroups_2024-Update
Seita.2G052800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G105700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g054450 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc06g008300 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc12g009730 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc12g009750 No alias No description available 0.02 Orthogroups_2024-Update
Sopen01g001740 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen01g001870 No alias Leucine rich repeat 0.04 Orthogroups_2024-Update
Sopen05g007250 No alias Leucine Rich repeats (2 copies) 0.04 Orthogroups_2024-Update
Sopen06g003130 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 20 78
IPR001611 Leu-rich_rpt 275 332
IPR001611 Leu-rich_rpt 195 209
IPR001611 Leu-rich_rpt 472 487
No external refs found!