1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G079400.1

Seita.6G079400.1


Description : Unknown function


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G079400.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Brara.F02490.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G014150.2 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G014180.3 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
MA_10430977g0010 No alias (at5g03240 : 285.0) encodes ubiquitin that is attached... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 73 139
IPR000626 Ubiquitin_dom 147 215
IPR000626 Ubiquitin_dom 3 62
No external refs found!