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  5. Seita.6G086300.1

Seita.6G086300.1


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G086300.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
A4A49_26789 No alias expansin-a3 0.02 Orthogroups_2024-Update
A4A49_33199 No alias expansin-a15 0.03 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
Bradi1g61190 No alias expansin A15 0.03 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.03 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp2g18610.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00000399-RA No alias (q7xud0|exp10_orysa : 316.0) Expansin-A10 precursor... 0.03 Orthogroups_2024-Update
PSME_00000910-RA No alias (at5g05290 : 323.0) Encodes an expansin. Naming... 0.04 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.04 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G135200 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s33_259V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Sobic.001G314600.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G121900.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.010G006200.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 67 152
IPR007117 Expansin_CBD 163 242
No external refs found!