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  5. Seita.6G093400.1

Seita.6G093400.1


Description : p-coumarate


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G093400.1
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.04 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
Bradi3g37300 No alias 4-coumarate:CoA ligase 2 0.04 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Brara.E02090.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
GRMZM2G096020 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
Glyma.14G223200 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
Glyma.18G076900 No alias acyl-CoA synthetase 5 0.05 Orthogroups_2024-Update
HORVU0Hr1G018190.6 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G030390.2 No alias p-coumarate 0.03 Orthogroups_2024-Update
Kfl00583_0040 kfl00583_0040_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_56692g0010 No alias (o24146|4cl2_tobac : 616.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update
MA_5g0040 No alias (at4g05160 : 362.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00010613-RA No alias (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00016046-RA No alias (at1g20510 : 211.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
Potri.008G031500 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Potri.T071600 No alias 4-coumarate:CoA ligase 5 0.02 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Seita.9G552000.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Sobic.003G391600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G089900.1 No alias p-coumarate 0.07 Orthogroups_2024-Update
Sopen03g001090 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen08g024910 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 53 471
IPR025110 AMP-bd_C 479 555
No external refs found!