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Description : amino acid transporter *(LHT)
Gene families : OG_42_0000536 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000536_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.6G097200.1 | |
| Cluster | HCAA Clusters: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 173454 | No alias | lysine histidine transporter 1 | 0.03 | Orthogroups_2024-Update | |
| Brara.D01095.1 | No alias | amino acid transporter *(LHT) | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G025500.1 | No alias | amino acid transporter *(LHT) | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G025700.1 | No alias | amino acid transporter *(LHT) | 0.04 | Orthogroups_2024-Update | |
| Sobic.007G092400.1 | No alias | amino acid transporter *(LHT) | 0.05 | Orthogroups_2024-Update | |
| Solyc02g093860 | No alias | Amino acid transporter, putative (AHRD V3.3 *** B9RBN4_RICCO) | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| CC | GO:0030684 | preribosome | IEP | Predicted GO |
| CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013057 | AA_transpt_TM | 34 | 430 |
| No external refs found! |