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  5. Seita.6G104100.1

Seita.6G104100.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G104100.1
Cluster HCAA Clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
A4A49_57236 No alias zinc finger protein 3 0.03 Orthogroups_2024-Update
Brara.C01188.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G127600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G217100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G107400 No alias zinc finger protein 8 0.02 Orthogroups_2024-Update
Glyma.10G260600 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.13G269400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G150800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
PSME_00004584-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.016G101300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G388000.1 No alias C2H2 subclass ZFP transcription factor 0.01 Orthogroups_2024-Update
Sobic.002G037000.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!