1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At4g29390

At4g29390


Description : 40S ribosomal protein S30 [Source:UniProtKB/Swiss-Prot;Acc:P49689]


Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g29390
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
227173 No alias Ribosomal protein S30 family protein 0.02 Orthogroups_2024-Update
Bradi1g48060 No alias Ribosomal protein S30 family protein 0.03 Orthogroups_2024-Update
Bradi3g54495 No alias Ribosomal protein S30 family protein 0.02 Orthogroups_2024-Update
Brara.A00791.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.C01230.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.I04721.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre16.g666301 No alias Ribosomal protein S30 family protein 0.11 Orthogroups_2024-Update
GRMZM2G054012 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
MA_10432727g0010 No alias (at5g56670 : 97.4) Ribosomal protein S30 family protein;... 0.04 Orthogroups_2024-Update
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.02 Orthogroups_2024-Update
PSME_00048165-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
Potri.012G086600 No alias Ribosomal protein S30 family protein 0.03 Orthogroups_2024-Update
Potri.015G084700 No alias Ribosomal protein S30 family protein 0.06 Orthogroups_2024-Update
Pp1s22_155V6 No alias 40s ribosomal protein s30 0.05 Orthogroups_2024-Update
Pp1s22_171V6 No alias 40s ribosomal protein s30 0.05 Orthogroups_2024-Update
Pp1s283_53V6 No alias 40s ribosomal protein s30 0.07 Orthogroups_2024-Update
Pp1s97_259V6 No alias 40s ribosomal protein s30 0.03 Orthogroups_2024-Update
Solyc08g076340 No alias 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA) 0.04 Orthogroups_2024-Update
Solyc12g008700 No alias peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4) 0.09 Orthogroups_2024-Update
evm.model.tig00001003.33 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 59
No external refs found!