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  5. Seita.6G140600.1

Seita.6G140600.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G140600.1

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G085086 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G157900 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G218850 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G041100 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G011060.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp1g12190.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Mp1g12200.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Mp2g01720.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.009G135300 No alias farnesylated protein 6 0.02 Orthogroups_2024-Update
Sobic.007G123400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g080070 No alias Heavy metal transport/detoxification superfamily protein... 0.01 Orthogroups_2024-Update
Sopen04g028900 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update
Sopen05g004130 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 150 204
No external refs found!