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  5. Seita.6G151500.1

Seita.6G151500.1


Description : assembly factor involved in RuBisCo assembly *(RbcX)


Gene families : OG_42_0008094 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G151500.1
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G007000 No alias Chaperonin-like RbcX protein 0.04 Orthogroups_2024-Update
Glyma.15G111400 No alias Chaperonin-like RbcX protein 0.05 Orthogroups_2024-Update
LOC_Os08g32930 No alias expressed protein 0.03 Orthogroups_2024-Update
Sopen02g025730 No alias RbcX protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0044183 protein binding involved in protein folding IEA 16Dec
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003435 Chaperonin_RcbX 65 170
No external refs found!