Seita.6G159400.1

Description : T2-type RNase *(RNS)

Gene families : OG_42_0000815 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.6G159400.1
Cluster	HCAA Clusters: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os09g36680	No alias	ribonuclease T2 family domain containing protein, expressed	0.02	Orthogroups_2024-Update
PSME_00018154-RA	No alias	(at2g02990 : 235.0) member of the ribonuclease T2...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	None	Extended
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	None	Extended
MF	GO:0033897	ribonuclease T2 activity	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	30	213

External Links

No external refs found!