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  5. Seita.6G159700.1

Seita.6G159700.1


Description : Unknown function


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G159700.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Bradi3g07060 No alias A20/AN1-like zinc finger family protein 0.04 Orthogroups_2024-Update
Brara.C02420.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01871.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G022940.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.015G131900 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.2G252300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G046000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G245800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G138200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G212200.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc10g083460 No alias Zinc finger A20 and AN1 domain-containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000058 Znf_AN1 194 233
IPR002653 Znf_A20 15 37
IPR002653 Znf_A20 118 140
No external refs found!