1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G160000.1

Seita.6G160000.1


Description : component *(eL34) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G160000.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
At1g26880 No alias 60S ribosomal protein L34-1... 0.03 Orthogroups_2024-Update
Brara.H02161.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Glyma.18G119100 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
PSME_00038465-RA No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.02 Orthogroups_2024-Update
Pp1s39_364V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
evm.model.tig00000632.3 No alias (at1g26880 : 109.0) Ribosomal protein L34e superfamily... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!