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  5. Seita.6G168500.1

Seita.6G168500.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G168500.1
Cluster HCAA Clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.03 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.03 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.02 Orthogroups_2024-Update
At4g02300 No alias Probable pectinesterase/pectinesterase inhibitor 39... 0.02 Orthogroups_2024-Update
Bradi1g16780 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.H01111.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.K01158.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
GRMZM2G125356 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.02G016500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.04G236200 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
Glyma.05G236900 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.07G024200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.07G024300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.09G042200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.09G076100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.15G183700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.17G028600 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.20G237800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
HORVU3Hr1G077630.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
HORVU4Hr1G054860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
Potri.003G021300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Pp1s378_15V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.02 Orthogroups_2024-Update
Sobic.002G416000.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.004G321600.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.006G105500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Sobic.007G146200.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.010G071300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sopen03g023630 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 356 652
IPR006501 Pectinesterase_inhib_dom 85 230
No external refs found!