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  5. Seita.6G169300.1

Seita.6G169300.1


Description : amino acid transporter *(AAP)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G169300.1
Cluster HCAA Clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Bradi4g23350 No alias amino acid permease 2 0.02 Orthogroups_2024-Update
GRMZM2G110195 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
Glyma.14G144200 No alias amino acid permease 8 0.03 Orthogroups_2024-Update
LOC_Os02g49060 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g08090 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
MA_18076g0010 No alias (at1g77380 : 343.0) Amino acid permease which transports... 0.03 Orthogroups_2024-Update
Seita.8G065400.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.006G115300.2 No alias amino acid transporter *(AAP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 235 433
IPR013057 AA_transpt_TM 31 203
No external refs found!